Lapi, Alessandro
(2023)
Artificial intelligence applications in digital onco-hematology.
[Laurea magistrale], Università di Bologna, Corso di Studio in
Physics [LM-DM270]
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Abstract
Artificial intelligence and digital pathology have revolutionized histopathology by converting
images into high-resolution digital formats and introducing computational methods
for image analysis. This thesis contributed to this context by aiming to stratify patients
with various hematological conditions based on bone marrow fibrosis. The study
involved the quantification of the percentage of bone marrow fibrosis on the hematopoietic
tissue, used as indicator for characterizing different hematological disorders on a
dataset of 1123 whole slide images of bone marrow biopsies. Hematopoietic tissue has
been segmented through a color decomposition technique, while the segmentation of the
fibrosis needed a more powerful segmentation model, which was trained on an active
semi-supervised learning (ASSL) pipeline. Thanks to the ASSL approach it was possible
to overcome the lack of annotated patches, resulting in more effective segmentation.
Masks obtained from segmentation were used to calculate fibrosis and tissue areas. Final
comparative analysis between control and disease revealed lower fibrosis percentages in
the control group. With respect to control, Acute Myeloid Leukemia and Myelodysplastic
Syndrome showed no significant differences, while Myeloproliferative Neoplasms
exhibited significant differentiation, underscoring the role of bone marrow fibrosis in
these conditions.
Abstract
Artificial intelligence and digital pathology have revolutionized histopathology by converting
images into high-resolution digital formats and introducing computational methods
for image analysis. This thesis contributed to this context by aiming to stratify patients
with various hematological conditions based on bone marrow fibrosis. The study
involved the quantification of the percentage of bone marrow fibrosis on the hematopoietic
tissue, used as indicator for characterizing different hematological disorders on a
dataset of 1123 whole slide images of bone marrow biopsies. Hematopoietic tissue has
been segmented through a color decomposition technique, while the segmentation of the
fibrosis needed a more powerful segmentation model, which was trained on an active
semi-supervised learning (ASSL) pipeline. Thanks to the ASSL approach it was possible
to overcome the lack of annotated patches, resulting in more effective segmentation.
Masks obtained from segmentation were used to calculate fibrosis and tissue areas. Final
comparative analysis between control and disease revealed lower fibrosis percentages in
the control group. With respect to control, Acute Myeloid Leukemia and Myelodysplastic
Syndrome showed no significant differences, while Myeloproliferative Neoplasms
exhibited significant differentiation, underscoring the role of bone marrow fibrosis in
these conditions.
Tipologia del documento
Tesi di laurea
(Laurea magistrale)
Autore della tesi
Lapi, Alessandro
Relatore della tesi
Correlatore della tesi
Scuola
Corso di studio
Indirizzo
Applied Physics
Ordinamento Cds
DM270
Parole chiave
Artificial Intelligence,Digital Pathology,Onco-hematology,Medical Image Analysis
Data di discussione della Tesi
15 Dicembre 2023
URI
Altri metadati
Tipologia del documento
Tesi di laurea
(NON SPECIFICATO)
Autore della tesi
Lapi, Alessandro
Relatore della tesi
Correlatore della tesi
Scuola
Corso di studio
Indirizzo
Applied Physics
Ordinamento Cds
DM270
Parole chiave
Artificial Intelligence,Digital Pathology,Onco-hematology,Medical Image Analysis
Data di discussione della Tesi
15 Dicembre 2023
URI
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